STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (827 aa)    
Predicted Functional Partners:
DHX15
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.997
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
   0.979
BUD31
BUD31 homolog.
    
 
 0.978
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.949
CDC40
Cell division cycle 40.
   
 0.947
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 
 0.933
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.924
DQX1
DEAQ box RNA-dependent ATPase 1.
   
 0.914
DHX32
DEAH (Asp-Glu-Ala-His) box polypeptide 32.
   
 0.914
SYF2
SYF2 pre-mRNA-splicing factor.
    
  0.911
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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