STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM5Phosphoglycerate mutase family member 5. (249 aa)    
Predicted Functional Partners:
BCL2L1
BCL2-like 1.
    
 0.962
DNM1L
Dynamin 1-like, transcript variant X3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.954
MLKL
Mixed lineage kinase domain-like.
    
 0.950
FUNDC2
FUN14 domain containing 2.
     
 0.795
FUNDC1
FUN14 domain containing 1.
     
 0.790
PINK1
PTEN induced putative kinase 1.
    
 
 0.745
PHB2
Prohibitin.
    
 
 0.601
KEAP1
Kelch-like ECH-associated protein 1.
    
 
 0.593
KLHL17
Kelch-like family member 17.
    
 
 0.593
RIPK1
Receptor (TNFRSF)-interacting serine-threonine kinase 1.
    
 
 0.561
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.