STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPICPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (190 aa)    
Predicted Functional Partners:
RANBP1
RAN binding protein 1.
 
 
 0.907
TBL3
Transducin (Beta)-like 3.
   
 
 0.694
P3H4
Prolyl 3-hydroxylase family member 4 (Non-enzymatic).
   
 0.691
CRTAP
Cartilage associated protein.
   
 0.691
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.669
WDR36
WD repeat domain 36.
   
 
 0.669
UTP15
WD_REPEATS_REGION domain-containing protein.
   
 
 0.657
PRPF19
Uncharacterized protein.
    
 0.656
XAB2
XPA binding protein 2.
    
 0.652
SNW1
SNW domain containing 1.
    
 0.652
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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