STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPOLGPoly(A) polymerase gamma. (768 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.957
CPSF4
Cleavage and polyadenylation specific factor 4, 30kDa.
    
 0.956
CPSF3
Cleavage and polyadenylation specific factor 3, 73kDa.
   
 0.956
WDR33
WD repeat domain 33, transcript variant X1.
   
 0.952
CSTF3
Cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa.
    
 0.945
CSTF2
Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa.
    
 0.938
PAPOLA
Poly(A) polymerase alpha.
  
 
 
0.905
A306_00015207
Symplekin-like.
   
 0.895
A306_00015033
Symplekin.
   
 0.895
PABPN1L
Poly(A) binding protein, nuclear 1-like (Cytoplasmic).
   
 0.886
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.