STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM161AFamily with sequence similarity 161, member A. (564 aa)    
Predicted Functional Partners:
CCT5
Chaperonin containing TCP1, subunit 5 (Epsilon).
 
 
 0.991
CCT2
Chaperonin containing TCP1, subunit 2 (Beta).
 
 
 0.990
CCT8
Chaperonin containing TCP1, subunit 8 (Theta), transcript variant X1.
 
 
 0.988
CCT7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
 
 
 0.983
CCT6A
Chaperonin containing TCP1, subunit 6A (Zeta 1).
 
 
 0.982
CCT3
Chaperonin containing TCP1, subunit 3 (Gamma).
 
 
 0.927
ERMARD
ER membrane-associated RNA degradation.
   
 0.926
BBS10
Bardet-Biedl syndrome 10.
   
 0.919
MKKS
McKusick-Kaufman syndrome, transcript variant X1.
   
 0.919
TCP1
T-complex 1.
 
 
 0.919
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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