STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3 (Fetal). (569 aa)    
Predicted Functional Partners:
MYL1
Myosin, light chain 1, alkali skeletal, fast, transcript variant X1.
   
 
 0.543
SIGLEC15
Sialic acid binding Ig-like lectin 15.
    
 
 0.508
MYOZ2
Myozenin 2.
   
  
 0.500
NEB
Nebulin.
   
 0.488
HPD
4-hydroxyphenylpyruvate dioxygenase.
      
 0.487
KLHL40
Kelch-like family member 40.
   
 
 0.484
TNNI2
Troponin I type 2 (Skeletal, fast).
   
 
 0.455
NRAP
Nebulin-related anchoring protein, transcript variant X1.
   
 0.453
CSRP3
Cysteine and glycine-rich protein 3 (Cardiac LIM protein).
   
  
 0.419
TNNI1
Troponin I type 1 (Skeletal, slow).
   
 
 0.418
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.