STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBD2Pterin-4-alpha-carbinolamine dehydratase 2 isoform X1. (102 aa)    
Predicted Functional Partners:
PAH
Phenylalanine hydroxylase.
  
 0.971
TPH2
Tryptophan hydroxylase 2.
  
 0.970
TH
Tyrosine hydroxylase.
  
 0.970
TPH1
Tryptophan hydroxylase 1.
  
 0.970
A306_00004490
Tyrosine 3-monooxygenase.
  
 0.970
QDPR
Quinoid dihydropteridine reductase.
   
 
 0.965
PCBD1
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
  
 
 
0.930
IYD
Iodotyrosine deiodinase.
  
 
  0.716
HGD
Homogentisate 1,2-dioxygenase, transcript variant X2.
  
  
 0.705
HNF1B
HNF1 homeobox B.
    
 
 0.640
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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