STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPGAT1Lysophosphatidylglycerol acyltransferase 1. (247 aa)    
Predicted Functional Partners:
CRLS1
Cardiolipin synthase 1.
  
 0.943
A306_00008713
Acyl-CoA:lysophosphatidylglycerol acyltransferase 1.
 
     0.934
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.925
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.920
LCLAT1
Lysocardiolipin acyltransferase 1.
     
0.911
GPAM
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.657
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.536
PAFAH1B2
Platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa).
      
 0.523
AASDH
Aminoadipate-semialdehyde dehydrogenase.
     
 0.513
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.461
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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