STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00005561Ras-related and estrogen-regulated growth inhibitor-like protein, transcript variant X2. (211 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.863
ITSN1
Intersectin 1 (SH3 domain protein).
    
 0.765
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.606
A306_00014198
Putative LOC102095206.
    
 0.565
MOSPD1
Motile sperm domain containing 1, transcript variant X1.
    
 0.529
KALRN
Kalirin, RhoGEF kinase.
   
 0.518
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 0.518
MYO9B
Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.510
MYO9A
Myosin IXA.
    
 0.510
GAK
Cyclin G associated kinase.
   
 0.481
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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