STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDAH1Dimethylarginine dimethylaminohydrolase 1. (221 aa)    
Predicted Functional Partners:
AGXT2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.640
OAT
Ornithine aminotransferase, transcript variant X2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.542
MLF2
Myeloid leukemia factor 2.
      
 0.523
FANCM
Fanconi anemia, complementation group M.
      
 0.491
CLDN5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.478
IYD
Iodotyrosine deiodinase.
      
 0.461
SAG
S-antigen retina and pineal gland (Arrestin).
      
 0.449
MARCH8
Membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase, transcript variant X2.
      
 0.449
ALDH18A1
Aldehyde dehydrogenase 18 family, member A1.
     
 0.429
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.