STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC3Structural maintenance of chromosomes protein. (1217 aa)    
Predicted Functional Partners:
NIPBL
Nipped-B protein.
   
 0.997
PDS5A
PDS5 cohesin associated factor A, transcript variant X1.
   
 0.977
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.972
SMC1B
Structural maintenance of chromosomes protein.
   
0.972
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.970
RAD21
RAD21 cohesin complex component.
   
 0.970
PDS5B
PDS5 cohesin associated factor B, transcript variant X1.
   
 0.968
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 0.967
ESCO1
Establishment of sister chromatid cohesion N-acetyltransferase 1.
   
 0.967
STAG2
Stromal antigen 2.
   
 0.962
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.