STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD6BLY6/PLAUR domain containing 6B. (169 aa)    
Predicted Functional Partners:
RPS6KC1
Ribosomal protein S6 kinase, 52kDa, polypeptide 1, transcript variant X2.
   
 
 0.681
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.553
KLC4
Kinesin light chain 4.
   
 0.551
APPBP2
Amyloid beta protein (Cytoplasmic tail) binding protein 2, transcript variant X1.
   
 0.551
TTC19
Tetratricopeptide repeat domain 19, transcript variant X1.
   
 0.551
KLC1
Kinesin light chain 1, transcript variant X1.
   
 0.551
NPHP3
Nephronophthisis 3 (Adolescent).
   
 0.551
BEND7
BEN domain containing 7, transcript variant X1.
      
 0.549
TATDN3
TatD DNase domain containing 3.
      
 0.545
ANGEL2
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.537
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.