STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC3Transient receptor potential cation channel, subfamily C, member 3; Belongs to the transient receptor (TC 1.A.4) family. (880 aa)    
Predicted Functional Partners:
STIM1
Stromal interaction molecule 1.
    
 0.643
TRPC6
Transient receptor potential cation channel, subfamily C, member 6; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.561
NCS1
Neuronal calcium sensor 1.
    
 0.556
STIM2
Stromal interaction molecule 2.
    
 0.533
TRPC1
Transient receptor potential cation channel, subfamily C, member 1.
  
 
0.509
GABRA6
Gamma-aminobutyric acid (GABA) A receptor, alpha 6; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.484
ADAD1
Adenosine deaminase domain containing 1 (Testis-specific).
      
 0.468
ATP6V0A1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
      
 0.461
GRM1
Glutamate receptor, metabotropic 1, transcript variant X1.
    
 
 0.446
TRPA1
Transient receptor potential cation channel, subfamily A, member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.418
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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