STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCOCShort coiled-coil protein. (132 aa)    
Predicted Functional Partners:
FEZ2
Fasciculation and elongation protein zeta 2 (Zygin II).
   
 
 0.804
ARL1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.796
A306_00014524
Fasciculation and elongation protein zeta-1.
   
 
 0.679
FEZ1
Fasciculation and elongation protein zeta 1 (Zygin I).
   
 
 0.638
ARFRP1
ADP-ribosylation factor related protein 1.
      
 0.552
WAC
WW domain containing adaptor with coiled-coil, transcript variant X1.
      
 0.550
PQLC1
PQ loop repeat containing 1.
      
 0.533
GCH1
GTP cyclohydrolase 1.
      
 0.531
PRPF38B
Pre-mRNA processing factor 38B.
      
 0.531
KCNT2
Potassium channel, sodium activated subfamily T, member 2, transcript variant X1.
      
 0.528
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.