STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYPL1Synaptophysin-like 1. (237 aa)    
Predicted Functional Partners:
A306_00012569
Vesicle-associated membrane protein 2.
   
 0.564
VAMP1
Vesicle-associated membrane protein 1 (Synaptobrevin 1).
   
 0.564
GTF2F1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
      
 0.529
GRIP2
Glutamate receptor interacting protein 2.
      
 0.523
SLC17A6
Solute carrier family 17 (Vesicular glutamate transporter), member 6.
   
 
 0.462
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.434
SYN2
Synapsin II.
   
 
 0.433
SYN3
Synapsin III.
   
 
 0.433
VAMP3
Vesicle-associated membrane protein 3.
   
 0.429
ITSN2
Intersectin 2.
      
 0.422
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.