STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC21BTetratricopeptide repeat domain 21B. (1049 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
   
 0.986
IFT43
Intraflagellar transport 43, transcript variant X1.
    
 0.984
WDR35
WD repeat-containing protein 35.
   
 0.984
UNC79
Uncharacterized protein.
   
 0.982
WDR19
WD repeat domain 19.
   
 0.976
IFT140
Intraflagellar transport 140.
   
 0.973
IFT74
Intraflagellar transport 74.
   
 0.868
IFT81
Intraflagellar transport 81.
     
 0.861
IFT20
Intraflagellar transport 20.
    
 0.852
IFT80
Intraflagellar transport 80.
   
 0.845
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.