STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH12orf4Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
A306_00015283
Protein C12orf4 homolog.
 
     0.923
TBCK
TBC1 domain containing kinase.
    
 
 0.639
A306_00013499
Protein phosphatase 1 regulatory subunit 21.
    
 
 0.559
A306_00013498
Protein phosphatase 1 regulatory subunit 21.
    
 
 0.559
ZNF330
Zinc finger protein 330.
      
 0.519
TMEM106C
Transmembrane protein 106C.
      
 0.518
EXOC8
Exocyst complex component 8.
   
    0.517
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.