STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00004421Potassium voltage-gated channel subfamily A member 1; Belongs to the potassium channel family. (491 aa)    
Predicted Functional Partners:
RPLP2
Ribosomal protein, large, P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.681
RPL26L1
Ribosomal protein L26-like 1.
  
 0.670
RPL35
Ribosomal protein L35.
   
 0.665
RPL23A
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.662
RPL35A
Ribosomal protein L35a.
   
 0.657
RPL24
Ribosomal protein L24.
   
 0.656
RPL32
Ribosomal protein L32.
   
 0.655
RPL31
Ribosomal protein L31.
   
 0.655
RPL30
Ribosomal protein L30.
   
 0.653
A306_00000347
Aldo_ket_red domain-containing protein.
   
 0.650
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.