STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSPNSarcospan, transcript variant X2. (140 aa)    
Predicted Functional Partners:
SGCG
Sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein), transcript variant X1.
   
 0.786
SGCE
Sarcoglycan, epsilon.
   
 
 0.717
DAG1
Dystroglycan 1 (Dystrophin-associated glycoprotein 1).
     
 0.678
SGCD
Sarcoglycan, delta (35kDa dystrophin-associated glycoprotein), transcript variant X1.
   
 0.641
SGCZ
Sarcoglycan, zeta.
   
 0.641
SGCB
Sarcoglycan, beta (43kDa dystrophin-associated glycoprotein).
     
 0.575
SNTA1
Syntrophin, alpha 1.
      
 0.523
A306_00004346
Dystroglycan-like.
      
 0.518
ARRDC2
Arrestin domain containing 2, transcript variant X1.
   
  
 0.458
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
  
 0.407
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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