STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC77Coiled-coil domain containing 77. (494 aa)    
Predicted Functional Partners:
NEMP1
Nuclear envelope integral membrane protein 1.
   
  
 0.570
DEPDC1B
DEP domain containing 1B, transcript variant X1.
   
 
 0.557
CCDC34
Coiled-coil domain containing 34.
   
  
 0.549
CUNH18orf54
Uncharacterized protein.
      
 0.548
CUNH3orf14
Uncharacterized protein.
      
 0.541
GSTCD
Glutathione S-transferase, C-terminal domain containing.
      
 0.537
CEP85
Centrosomal protein 85kDa, transcript variant X1.
      
 0.528
ZNF367
Zinc finger protein 367.
      
 0.520
ARHGAP11A
Rho GTPase activating protein 11A.
      
 0.493
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.479
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.