STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00003754Cytochrome c oxidase assembly factor 5. (75 aa)    
Predicted Functional Partners:
A306_00003709
Cytochrome c oxidase copper chaperone.
   
  
 0.716
MRPL51
Mitochondrial ribosomal protein L51.
   
  
 0.696
TIMM9
zf-Tim10_DDP domain-containing protein.
   
  
 0.660
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
  
 0.654
GFER
Sulfhydryl oxidase.
   
  
 0.637
A306_00011631
Protein SCO1 homolog, mitochondrial.
   
  
 0.630
PET117
PET117 homolog.
   
  
 0.630
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.586
A306_00006388
Cytochrome c oxidase assembly protein COX11, mitochondrial.
   
  
 0.566
CHRAC1
Chromatin accessibility complex 1.
      
 0.561
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.