STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUCA1CGuanylate cyclase activator 1C. (189 aa)    
Predicted Functional Partners:
A306_00014986
Guanylate cyclase.
    
 0.923
GUCY2F
Guanylate cyclase.
    
 0.923
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
    
 0.714
PI4KB
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.531
A306_00009281
Cyclic nucleotide-gated cation channel beta-1-like.
   
 0.498
CNGB1
Cyclic nucleotide gated channel beta 1.
   
 0.498
CNGB3
Cyclic nucleotide gated channel beta 3.
   
 0.498
WDR90
WD repeat domain 90.
    
 0.479
KCND2
DUF3399 domain-containing protein.
    
 0.476
KCND3
Potassium channel, voltage gated Shal related subfamily D, member 3, transcript variant X1; Belongs to the potassium channel family.
    
 0.476
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.