STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLR3Toll-like receptor 3; Belongs to the Toll-like receptor family. (895 aa)    
Predicted Functional Partners:
TICAM1
Toll-like receptor adaptor molecule 1.
   
 0.986
UNC93B1
Uncharacterized protein.
    
 0.978
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.972
RIPK1
Receptor (TNFRSF)-interacting serine-threonine kinase 1.
   
 0.966
TAB2
TGF-beta activated kinase 1/MAP3K7 binding protein 2.
    
 0.952
MAP3K7
Mitogen-activated protein kinase kinase kinase 7, transcript variant X1.
    
 0.944
TAB1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
    
 0.932
MYD88
Myeloid differentiation primary response 88.
   
 0.892
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.833
CD4
CD4 molecule.
   
 0.801
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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