STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11BB-cell CLL/lymphoma 11B (Zinc finger protein), transcript variant X2. (884 aa)    
Predicted Functional Partners:
BATF
Basic leucine zipper transcription factor, ATF-like.
    
 0.559
TBR1
T-box, brain, 1.
    
 
 0.538
CUX1
Cut-like homeobox 1.
    
 
 0.536
BCL11A
B-cell CLL/lymphoma 11A (Zinc finger protein).
  
 
0.513
NKAP
NFKB activating protein.
      
 0.497
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.457
RBBP4
Retinoblastoma binding protein 4.
    
 0.447
RBBP7
Retinoblastoma binding protein 7.
    
 0.447
BACH2
BTB and CNC homology 1, basic leucine zipper transcription factor 2.
      
 0.445
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.