Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG16L1 | PTGR2 | A0A2I0LTT1 | A0A2I0MPM8 | Autophagy related 16-like 1, transcript variant X1. | Prostaglandin reductase 2, transcript variant X2. | 0.539 |
CAT | PTGR2 | A0A2I0MHZ3 | A0A2I0MPM8 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Prostaglandin reductase 2, transcript variant X2. | 0.416 |
METAP1D | PTGR2 | A0A2I0MIL3 | A0A2I0MPM8 | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Prostaglandin reductase 2, transcript variant X2. | 0.561 |
MYOZ1 | PTGR2 | A0A2I0MF83 | A0A2I0MPM8 | Myozenin 1, transcript variant X1. | Prostaglandin reductase 2, transcript variant X2. | 0.546 |
NT5E | PTGR2 | A0A2I0MTZ5 | A0A2I0MPM8 | 5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family. | Prostaglandin reductase 2, transcript variant X2. | 0.445 |
PTGR2 | ATG16L1 | A0A2I0MPM8 | A0A2I0LTT1 | Prostaglandin reductase 2, transcript variant X2. | Autophagy related 16-like 1, transcript variant X1. | 0.539 |
PTGR2 | CAT | A0A2I0MPM8 | A0A2I0MHZ3 | Prostaglandin reductase 2, transcript variant X2. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.416 |
PTGR2 | METAP1D | A0A2I0MPM8 | A0A2I0MIL3 | Prostaglandin reductase 2, transcript variant X2. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.561 |
PTGR2 | MYOZ1 | A0A2I0MPM8 | A0A2I0MF83 | Prostaglandin reductase 2, transcript variant X2. | Myozenin 1, transcript variant X1. | 0.546 |
PTGR2 | NT5E | A0A2I0MPM8 | A0A2I0MTZ5 | Prostaglandin reductase 2, transcript variant X2. | 5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family. | 0.445 |