STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC1COX assembly mitochondrial protein. (108 aa)    
Predicted Functional Partners:
AZI2
5-azacytidine induced 2.
      
 0.663
A306_00003709
Cytochrome c oxidase copper chaperone.
   
  
 0.563
A306_00003754
Cytochrome c oxidase assembly factor 5.
   
  
 0.539
XRCC6BP1
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.527
CCDC12
Coiled-coil domain containing 12.
      
 0.526
ZFC3H1
Zinc finger, C3H1-type containing.
      
 0.445
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.443
CMC2
COX assembly mitochondrial protein.
   
 
 0.409
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.