STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METTL6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (293 aa)    
Predicted Functional Partners:
TSR3
Probable ribosome biogenesis protein A306_00008440; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
 
  
 0.795
SH3BP5
SH3-domain binding protein 5 (BTK-associated).
 
      0.722
NSUN5
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.699
TRMT10B
SAM-dependent MTase TRM10-type domain-containing protein.
   
  
 0.554
TRMT10A
SAM-dependent MTase TRM10-type domain-containing protein.
   
  
 0.545
EAF1
ELL associated factor 1.
      
 0.545
RSPRY1
Ring finger and SPRY domain containing 1.
   
  
 0.539
RERG
RAS-like, estrogen-regulated, growth inhibitor, transcript variant X1.
      
 0.535
THRAP3
Thyroid hormone receptor associated protein 3, transcript variant X1.
      
 0.524
A306_00012013
Ras-related and estrogen-regulated growth inhibitor-like.
      
 0.523
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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