STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUB1Negative regulator of ubiquitin-like proteins 1, transcript variant X1. (727 aa)    
Predicted Functional Partners:
PSMD4
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4.
   
 0.900
PSMD5
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 5.
     
 0.726
PSME3
Proteasome (Prosome, macropain) activator subunit 3 (PA28 gamma Ki).
     
 0.655
ZFAND4
Zinc finger, AN1-type domain 4.
    
 0.650
PSMC1
Proteasome (Prosome, macropain) 26S subunit, ATPase, 1; Belongs to the AAA ATPase family.
    
 0.633
PSMC3
Proteasome (Prosome, macropain) 26S subunit, ATPase, 3; Belongs to the AAA ATPase family.
     
 0.631
PSMC6
Proteasome (Prosome, macropain) 26S subunit, ATPase, 6; Belongs to the AAA ATPase family.
     
 0.630
PSMD3
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 3.
     
 0.628
SENP8
SUMO/sentrin peptidase family member, NEDD8 specific.
     
 0.626
PSMC5
Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.
    
  0.623
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.