STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNX1Runt-related transcription factor. (446 aa)    
Predicted Functional Partners:
MYSM1
Myb-like, SWIRM and MPN domains 1.
    
  0.918
CBFB
Core-binding factor, beta subunit, transcript variant X2.
    
 0.911
TAL1
T-cell acute lymphocytic leukemia 1, transcript variant X1.
    
 0.694
ETS1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
   
 0.651
ETS2
Protein C-ets-2; Transcription factor; Belongs to the ETS family.
   
 0.651
SMAD4
Mothers against decapentaplegic homolog.
   
 0.629
STUB1
U-box domain-containing protein.
    
 0.617
AR
Androgen receptor.
   
 0.600
ZFHX3
Zinc finger homeobox 3.
     
 0.598
ZFHX4
Zinc finger homeobox 4.
     
 0.598
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.