STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO6Myosin VI, transcript variant X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1285 aa)    
Predicted Functional Partners:
DAB2
PID domain-containing protein.
    
 0.942
PAK3
Non-specific serine/threonine protein kinase.
    
  0.941
PAK1
Non-specific serine/threonine protein kinase.
    
  0.941
GIPC3
Uncharacterized protein.
    
 
 0.849
GIPC2
GIPC PDZ domain containing family, member 2.
    
 
 0.849
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.817
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.817
RPS27A
Ribosomal protein S27a.
    
   0.812
SPDYA
Speedy/RINGO cell cycle regulator family member A.
    
 
 0.747
TOM1L2
Target of myb1 like 2 membrane trafficking protein, transcript variant X1; Belongs to the TOM1 family.
    
 
 0.743
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.