STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC1Fibronectin type III domain containing 1. (1661 aa)    
Predicted Functional Partners:
FXYD6
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.631
A306_00000482
Uncharacterized protein.
   
 0.561
A306_00015213
Potassium-transporting ATPase alpha chain 1.
   
 0.561
THTPA
Thiamine triphosphatase, transcript variant X1.
   
 0.561
A306_00013007
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.561
ATP12A
Sodium/potassium-transporting ATPase subunit alpha.
   
 0.561
ATP1A1
Sodium/potassium-transporting ATPase subunit alpha.
   
 0.561
SNW1
SNW domain containing 1.
    
  0.553
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
      
 0.549
NDUFAF6
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6.
   
  
 0.542
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.