STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80CINO80 complex subunit C. (259 aa)    
Predicted Functional Partners:
ACTR5
Uncharacterized protein; Belongs to the actin family.
    
 0.997
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.994
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
  
 
 0.991
ACTL6A
Actin-like 6A; Belongs to the actin family.
    
 0.952
INO80
INO80 complex subunit.
    
 0.945
WBP1L
WW domain binding protein 1-like, transcript variant X1.
    
 0.911
INO80D
INO80 complex subunit D.
    
 0.904
NFRKB
Nuclear factor related to kappaB binding protein, transcript variant X1.
    
 0.898
RPAP3
RNA polymerase II associated protein 3, transcript variant X1.
    
 0.842
YY1
YY1 transcription factor.
    
 0.841
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.