STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (628 aa)    
Predicted Functional Partners:
SIX1
SIX homeobox 1.
   
 
 0.653
SIX4
SIX homeobox 4.
   
 
 0.653
ANHX
Anomalous homeobox.
   
 
 0.484
SIX3
SIX homeobox 3.
   
 
 0.484
SIX6
SIX homeobox 6.
   
 
 0.484
A306_00000139
Paired domain-containing protein.
      
 0.465
DACH2
Dachshund family transcription factor 2.
    
 
 0.452
DACH1
Dachshund family transcription factor 1.
    
 
 0.452
EYA3
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
 
0.425
EYA2
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
 
0.425
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.