STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP14Ubiquitin carboxyl-terminal hydrolase. (466 aa)    
Predicted Functional Partners:
PSMD12
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12.
   
 0.999
PSMD4
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4.
   
 0.998
PSMD11
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 11.
   
 0.998
PSMC5
Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.
   
 0.998
PSMD7
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 7.
   
 0.998
PSMD6
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6.
   
 0.998
PSMC2
Proteasome (Prosome, macropain) 26S subunit, ATPase, 2; Belongs to the AAA ATPase family.
   
 0.998
PSMD14
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14.
   
 0.998
PSMC3
Proteasome (Prosome, macropain) 26S subunit, ATPase, 3; Belongs to the AAA ATPase family.
   
 0.998
PSMC1
Proteasome (Prosome, macropain) 26S subunit, ATPase, 1; Belongs to the AAA ATPase family.
   
 0.998
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.