STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP23Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.995
A306_00009276
Pancreatic secretory granule membrane major glycoprotein GP2-like.
   
 0.962
UTP14A
Uncharacterized protein.
   
 
 0.954
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.947
NOP14
NOP14 nucleolar protein.
   
 
 0.882
UTP3
Sas10 domain-containing protein.
   
 
 0.868
EMG1
EMG1 N1-specific pseudouridine methyltransferase, transcript variant X1.
   
 0.830
RPF2
Ribosome production factor 2 homolog.
   
  
 0.817
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.810
DDX52-2
Putative ATP-dependent RNA helicase DDX52.
   
 0.797
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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