STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4C. (110 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6 interacting protein.
   
 0.989
CHMP7
Charged multivesicular body protein 7.
    
 0.984
CHMP2A
Charged multivesicular body protein 2A.
   
 0.956
CHMP6
Charged multivesicular body protein 6.
    
 0.954
CHMP5
Charged multivesicular body protein 5.
   
 0.950
IST1
Uncharacterized protein.
    
 0.911
CHMP4B
Charged multivesicular body protein 4B.
  
  
 
0.909
SNF8
SNF8, ESCRT-II complex subunit.
    
 0.903
MLKL
Mixed lineage kinase domain-like.
    
 0.903
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.886
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.