STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00001352Y+L amino acid transporter 2. (507 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 (Amino acid transporter heavy chain), member 1.
   
 0.879
A306_00014000
KIAA0513 ortholog, transcript variant X3.
   
 0.534
ALKBH2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.534
ALKBH3
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
   
 0.534
A306_00009048
2-epi-5-epi-valiolone synthase.
   
 0.424
A306_00007619
Putative LOC106145739.
   
 0.405
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.