STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00001535Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (147 aa)    
Predicted Functional Partners:
RBP4
Retinol binding protein 4, plasma, transcript variant X1; Belongs to the calycin superfamily. Lipocalin family.
   
 0.955
A306_00005835
Uricase.
  
 
 0.888
APP
Amyloid beta (A4) protein.
    
 0.705
STRA6
Stimulated by retinoic acid 6.
    
 0.702
APOD
Apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family.
  
 
 0.632
GC
Group-specific component (Vitamin D binding protein).
   
  
 0.624
RBP1
Retinol binding protein 1, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.603
APOA1
Apolipoprotein A-I.
   
 0.580
ALB
Albumin.
   
 
 0.577
KMO
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
  
 
 0.505
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.