STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DESI1Desumoylating isopeptidase 1, transcript variant X1. (169 aa)    
Predicted Functional Partners:
UBQLN4
Ubiquilin 4.
    
 
 0.929
PSMD12
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12.
   
   0.919
PSMD4
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4.
    
   0.917
TMBIM6
Transmembrane BAX inhibitor motif containing 6; Belongs to the BI1 family.
    
   0.917
PSMB3
Proteasome (Prosome, macropain) subunit, beta type, 3.
    
   0.917
PSMD11
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 11.
    
   0.917
PSMC5
Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.
   
   0.917
PSMA2
Proteasome subunit alpha type.
    
   0.917
PSMA5
Proteasome endopeptidase complex.
    
   0.917
PSMA4
Proteasome subunit alpha type.
    
   0.917
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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