STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ75663.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
SEA82908.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.997
SEA82889.1
Electron transfer flavoprotein beta subunit.
 
 
 0.955
SEA38440.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.945
SEB00479.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.937
SDZ93019.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 0.929
SEA21048.1
Acyl transferase domain-containing protein.
  
 0.912
SDZ93494.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.790
SEA36105.1
Enoyl-CoA hydratase/carnithine racemase.
  
  0.787
SEA75465.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.759
SDZ96348.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.756
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.