Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ78892.1 | SDZ78916.1 | SAMN05444370_101357 | SAMN05444370_101358 | Uncharacterized conserved protein, DUF952 family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.975 |
SDZ78892.1 | SEA18990.1 | SAMN05444370_101357 | SAMN05444370_103402 | Uncharacterized conserved protein, DUF952 family. | Putative signal transducing protein. | 0.436 |
SDZ78892.1 | SEA77614.1 | SAMN05444370_101357 | SAMN05444370_111108 | Uncharacterized conserved protein, DUF952 family. | N-acetylmuramoyl-L-alanine amidase. | 0.614 |
SDZ78892.1 | lpxC | SAMN05444370_101357 | SAMN05444370_101356 | Uncharacterized conserved protein, DUF952 family. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.475 |
SDZ78916.1 | SDZ78892.1 | SAMN05444370_101358 | SAMN05444370_101357 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Uncharacterized conserved protein, DUF952 family. | 0.975 |
SDZ78916.1 | lpxC | SAMN05444370_101358 | SAMN05444370_101356 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.475 |
SEA18990.1 | SDZ78892.1 | SAMN05444370_103402 | SAMN05444370_101357 | Putative signal transducing protein. | Uncharacterized conserved protein, DUF952 family. | 0.436 |
SEA77614.1 | SDZ78892.1 | SAMN05444370_111108 | SAMN05444370_101357 | N-acetylmuramoyl-L-alanine amidase. | Uncharacterized conserved protein, DUF952 family. | 0.614 |
lpxC | SDZ78892.1 | SAMN05444370_101356 | SAMN05444370_101357 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | Uncharacterized conserved protein, DUF952 family. | 0.475 |
lpxC | SDZ78916.1 | SAMN05444370_101356 | SAMN05444370_101358 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.475 |