STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ88678.1Alpha-glucosidase. (553 aa)    
Predicted Functional Partners:
SEA97990.1
Amino acid/polyamine/organocation transporter, APC superfamily.
   
 0.985
SEA30379.1
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.934
SEA16701.1
4-alpha-glucanotransferase.
 
 
 0.920
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.911
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.881
SEA53881.1
Fructokinase.
    
 0.869
SDZ95283.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.864
SEA16715.1
Phosphoglucomutase.
  
 
 0.862
SDZ88727.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
 0.856
SEA61355.1
Beta-glucosidase.
   
 
 0.856
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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