STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ88748.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (424 aa)    
Predicted Functional Partners:
SDZ88727.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.966
SDZ88700.1
Trehalose/maltose transport system permease protein.
 
  0.953
SDZ88652.1
Multiple sugar transport system ATP-binding protein/multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.757
SEA58373.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.741
SEA72431.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.728
SEA12327.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.724
SEA12298.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.716
SEA72410.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.703
SEA51096.1
Sorbitol ABC transporter membrane protein.
  
  0.695
SEA85507.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.694
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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