STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA09181.1Phospholipid transport system substrate-binding protein. (194 aa)    
Predicted Functional Partners:
SEA11350.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.993
SEA14329.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 
 0.974
SEA14301.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 
 0.972
SEA09205.1
Phospholipid-binding lipoprotein MlaA.
 
 
 
 0.972
SEA09158.1
Hypothetical protein.
       0.773
SEA83007.1
Protein of unknown function.
  
     0.708
SEA09128.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.682
SEA09259.1
ATP-binding cassette, subfamily C.
       0.624
SEA82991.1
Outer membrane protein (porin).
  
 
   0.578
SEA75696.1
Chemotaxis protein CheX.
    
  0.533
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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