STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA21135.1L-lactate dehydrogenase complex protein LldE. (255 aa)    
Predicted Functional Partners:
SEA21165.1
L-lactate dehydrogenase complex protein LldF.
 0.999
SEA21192.1
L-lactate dehydrogenase complex protein LldG.
 
 
 0.987
SEA84996.1
Glycolate oxidase.
 
 0.940
SDZ77878.1
Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
  0.883
SEA66791.1
4Fe-4S dicluster domain-containing protein.
    
 0.861
SEA84967.1
Glycolate oxidase FAD binding subunit.
 
 
 0.851
SEA89193.1
Glutamate synthase (NADPH) large subunit.
    
 0.839
SEA51715.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.831
SDZ92383.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
 
 
 0.805
SEA18621.1
FAD/FMN-containing dehydrogenase.
 
 0.801
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
Server load: low (16%) [HD]