STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA35057.1NitT/TauT family transport system ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SEA35085.1
NitT/TauT family transport system permease protein.
 
  0.964
SEA35108.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.960
SEA35032.1
Agmatinase; Belongs to the arginase family.
 
     0.902
SEB02647.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.882
SEA35011.1
Hypothetical protein.
       0.822
SEA34988.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.800
SEA43709.1
Allophanate hydrolase.
  
     0.659
SEB08132.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
      0.593
SEA33254.1
NitT/TauT family transport system permease protein.
 
 
 0.551
SDZ74742.1
NitT/TauT family transport system permease protein.
 
 
  0.515
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.