Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ74243.1 | SDZ77326.1 | SAMN05444370_101105 | SAMN05444370_101278 | Phytoene synthase. | Phytoene/squalene synthetase. | 0.849 |
SDZ74243.1 | SDZ80045.1 | SAMN05444370_101105 | SAMN05444370_101417 | Phytoene synthase. | Geranylgeranyl reductase. | 0.990 |
SDZ74243.1 | SDZ93685.1 | SAMN05444370_101105 | SAMN05444370_102249 | Phytoene synthase. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.856 |
SDZ74243.1 | SEA18960.1 | SAMN05444370_101105 | SAMN05444370_103401 | Phytoene synthase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.920 |
SDZ74243.1 | SEA37734.1 | SAMN05444370_101105 | SAMN05444370_104314 | Phytoene synthase. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.903 |
SDZ74243.1 | idi | SAMN05444370_101105 | SAMN05444370_104183 | Phytoene synthase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.693 |
SDZ77326.1 | SDZ74243.1 | SAMN05444370_101278 | SAMN05444370_101105 | Phytoene/squalene synthetase. | Phytoene synthase. | 0.849 |
SDZ77326.1 | SDZ80045.1 | SAMN05444370_101278 | SAMN05444370_101417 | Phytoene/squalene synthetase. | Geranylgeranyl reductase. | 0.870 |
SDZ77326.1 | SDZ93685.1 | SAMN05444370_101278 | SAMN05444370_102249 | Phytoene/squalene synthetase. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.856 |
SDZ77326.1 | SEA18960.1 | SAMN05444370_101278 | SAMN05444370_103401 | Phytoene/squalene synthetase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.910 |
SDZ77326.1 | SEA37734.1 | SAMN05444370_101278 | SAMN05444370_104314 | Phytoene/squalene synthetase. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.847 |
SDZ77326.1 | idi | SAMN05444370_101278 | SAMN05444370_104183 | Phytoene/squalene synthetase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.596 |
SDZ80045.1 | SDZ74243.1 | SAMN05444370_101417 | SAMN05444370_101105 | Geranylgeranyl reductase. | Phytoene synthase. | 0.990 |
SDZ80045.1 | SDZ77326.1 | SAMN05444370_101417 | SAMN05444370_101278 | Geranylgeranyl reductase. | Phytoene/squalene synthetase. | 0.870 |
SDZ80045.1 | SEA37734.1 | SAMN05444370_101417 | SAMN05444370_104314 | Geranylgeranyl reductase. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.813 |
SDZ80045.1 | idi | SAMN05444370_101417 | SAMN05444370_104183 | Geranylgeranyl reductase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.626 |
SDZ93685.1 | SDZ74243.1 | SAMN05444370_102249 | SAMN05444370_101105 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phytoene synthase. | 0.856 |
SDZ93685.1 | SDZ77326.1 | SAMN05444370_102249 | SAMN05444370_101278 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phytoene/squalene synthetase. | 0.856 |
SDZ93685.1 | SEA18960.1 | SAMN05444370_102249 | SAMN05444370_103401 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.946 |
SDZ93685.1 | SEA37734.1 | SAMN05444370_102249 | SAMN05444370_104314 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.917 |
page 1 of 4