STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA38205.13-oxoacyl-[acyl-carrier protein] reductase. (246 aa)    
Predicted Functional Partners:
SEA51388.1
Propane monooxygenase reductase subunit.
 
 0.827
SEA21048.1
Acyl transferase domain-containing protein.
 
 0.794
SEA89193.1
Glutamate synthase (NADPH) large subunit.
     
 0.731
SEA38227.1
Hypothetical protein.
       0.568
SEA91835.1
Hypothetical protein.
    
  0.567
SEA99780.1
Putative ABC transport system ATP-binding protein.
    
  0.567
SEA23460.1
[acyl-carrier-protein] S-malonyltransferase.
 
 
  0.549
SEA64728.1
Mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.533
SEA22636.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.515
SEA46800.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.511
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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