STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA68196.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
SEA68248.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.982
SEA68273.1
Nucleoside-binding protein.
 
 
 0.972
SEA68223.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.967
SEA36559.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.958
SEA09686.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.945
SEA09655.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.918
SEA36611.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.917
SEA43498.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.904
SEA88696.1
Basic membrane protein A.
 
 
 0.883
SEA88678.1
Nucleoside-binding protein.
 
 
 0.871
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.