STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA73396.1Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (585 aa)    
Predicted Functional Partners:
SEA29641.1
Putative NADPH-quinone reductase (modulator of drug activity B).
  
 
 0.979
SEA69898.1
Putative NADPH-quinone reductase (modulator of drug activity B).
  
 
 0.979
SEA56093.1
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.921
SEA56112.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.921
SEB05270.1
Protein of unknown function.
    
   0.921
SEA10965.1
Protein of unknown function.
    
   0.907
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.813
SEA82729.1
Cu+-exporting ATPase.
  
  
 0.743
SDZ73116.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.712
SEA31490.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.709
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.